Publications in 2012

Youngchul Cha, Junghoo Cho, Social-network analysis using topic models. In Proceedings of the International ACM SIGIR Conference on Research and Development in Information Retrieval (SIGIR), August 2012.

Chu-Cheng Hsieh, Junghoo Cho, Finding similar items by leveraging social tag clouds. In Proceedings of the ACM Symposium on Applied Computing (SAC),March 2012

Yingyi Bu, Vinayak Borkar, Michael J. Carey, Joshua Rosen, Neoklis Polyzotis, Tyson Condie, Markus Weimer and Raghu Ramakrishnan. “Scaling Datalog for Machine Learning on Big Data.” Tech Report (arXiv:1203.0160), 2012

Xiang Zhang, Shunping Huang, Zhaojun Zhang, Wei Wang, Mining Genome-Wide Genetic Markers, PLOS Computation Biology, vol. 8, no. 12, e1002828, 2012.

Eric Yi Liu, Zhishan Guo, Xiang Zhang, Vladimir Jojic, and Wei Wang, Metric learning from relative comparisons by minimizing squared residual, Proceedings of the 12th IEEE International Conference on Data Mining (ICDM), pp. 978-983, 2012.

Wei Cheng, Xiang Zhang, Feng Pan, and Wei Wang, Hierarchical co-clustering based on entropy splitting, Proceedings of the 20th ACM Conference on Information and Knowledge Management (CIKM), pp. 1472-1476, 2012.

Wei Cheng, Xiang Zhang, Wei Wang, Yubao Wu, Xiaolin Yin, Jing Li and David Heckerman, Inferring novel associations between SNP sets and gene sets in eQTL study using sparse graphical model, Proceedings of the ACM International Conference on Bioinformatics and Computational Biology (ACMBCB),pp. 466-472, 2012.

Xiang Zhang, Wei Cheng, Jennifer Listgarten, Carl Kadie, Shunping Huang,Wei Wang, and David Heckerman, Learning transcriptional regulatory relationships using sparse graphical models, PLoS ONE, vol. 7, no. 5, e357622012, 2012.

Eric Yi Liu, Steven Buyske, Aaron K. Aragaki, Ulrike Peters, Eric Boerwinkle, Chris Carlson, Cara Carty, Dana C. Crawford, Jeff Haessler, Lucia A. Hindorff, Loic Le Marchand, Teri A. Manolio, Tara Matise, Wei Wang, Charles Kooperberg, Kari E. North, and Yun Li, Genotype imputation of Metabochip SNPs using a study-specific reference panel of ~4,000 haplotypes in African Americans from the Women′s Health Initiative, Genetic Epidemiology, vol. 36, no. 2, pp.107-117, 2012.

Xiang Zhang, Shunping Huang, Wei Sun, andWei Wang, Rapid and robust resampling-based multiple testing correction with application in genome-wide eQTL study, Genetics, vol. 190, no. 4, pp. 1511-1520, 2012.

James J Crowley, Yunjung Kim, Jin Peng Szatkiewicz, Amanda L Pratt, Corey R Quackenbush, Daniel E Adkins, Edwin van den Oord, Molly A Bogue, Hyuna Yang, Wei Wang, David W Threadgill, Fernando Pardo-Manuel de Villena, Howard L McLeod, and Patrick F Sullivan, Genome-wide association mapping of loci for antipsychotic-induced extrapyramidal symptoms in mice, Mammalian Genome, vol. 23, no. 5-6, pp. 322-335, 2012.

Mingsheng Long, Jianmin Wang, Guiguang Ding, Wei Cheng, Xiang Zhang, and Wei Wang, Dual transfer learning, Proceedings of the 12th SIAM International Conference on Data Mining (SDM), pp. 540-551, 2012.

Kai Xia, Andrey A Shabalin, Shunping Huang, Vered Madar, Yi-Hui Zhou, Wei Wang, Fei Zou, Wei Sun, Patrick F Sullivan, Fred A Wright, seeQTL: a searchable database for human eQTLs, Bioinformatics, vol. 28, no. 3, pp. 451-452, 2012.

Collaborative Cross Consortium, The genome architecture of the Collaborative Cross mouse genetic reference population, Genetics, vol. 190, no. 2, pp. 389-401, 2012.

Zhaojun Zhang, Xiang Zhang, and Wei Wang, HTreeQA: using semi-perfect phylogeny trees in quantitative trait loci study on genotype data, G3: Genes, Genomes, Genetics, vol. 2, no. 2, pp. 175-189, 2012.

Mirjana Mazuran, Edoardo Serra, Carlo Zaniolo, Extending the Power of Datalog Recursion. VLDB Journal, accepted November 2012.

Nikolay Laptev, Carlo Zaniolo and Tsai-Ching Lu, BOOT-TS: A Scalable Bootstrap for Massive Time-Series Data. Big Learning: NIPS 2012 Workshop. December 8, Lake Tahoe, Nevada, USA.

Nikolay Laptev, Kai Zeng and Carlo Zaniolo, Early Accurate Results for Advanced Analytics on MapReduce. PVLDB 5(10): 1028-1039 (2012).

Shi Gao, Carlo Zaniolo, Supporting Database Provenance under Schema Evolution. ER Workshops 2012: 67-77.

Carlo Zaniolo, Logical Foundations of Continuous Query Languages for Data Streams.Datalog 2012: 177-189.

Shi Gao and Carlo Zaniolo, Provenance Management in Databases Under Schema Evolution. 4th USENIX Workshop on the theory and practice of provenance. June 14-15, Boston MA.

Nikolay Laptev, Kai Zeng, Carlo Zaniolo, Early Accurate Results for Advanced Analytics on MapReduce. PVLDB 5(10): 1028-1039 (2012).

Braverman, Rafail Ostrovsky, Carlo Zaniolo, Optimal Sampling From Sliding Windows.J. Comput. Syst. Sci., 78(1): 260-272 (2012).

Maurizio Atzori, Carlo Zaniolo, SWiPE: searching wikipedia by example. WWW (Companion Volume) 2012: 309-312.

Barzan Mozafari, Kai Zeng, Carlo Zaniolo, High-performance complex event processing over XML streams. SIGMOD Conference 2012: 253-264.

Nikolay Laptev, Carlo Zaniolo, Optimization of Massive Pattern Queries by Dynamic Configuration Morphing. ICDE 2012: 917-928

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